Primo MSP 3.4: Methylation Specific PCR Primer Design
Click here for more Primo family of PCR primer
Primo MSP 3.4 is a PCR primer design program
for methylation specific PCR (MSP) and bisulphite sequencing.
To use the program, copy and paste your CpG island sequence into the input
window, select a PCR type and click on go.
For normal PCR primer design, please use
Primo Pro 3.4 which
reduces PCR noise by lowering the probability of random primering. As a result of reduced random priming,
we expect improved amplification efficiency and cleaner products, especially for RT-PCR.
Order Primo Pro 3.4
New in Primo Pro 3.4 --- batch mode for
Order Primo MSP 3.4
Methods of Detection of Methylated Nucleic Acids are covered by US Patents 5,786,146, 6,017,704, 6,300,756, 6,265,171 & other patents.
For license information, please contact Chemicon International.
Primo Online runs on Java-enabled browsers|
PC: Internet Explorer 5.5 or higher and Netscape 4.08 or higher
Mac: Internet Explorer 5.0, IE5.1.4 or higher (IE5.1 will not work because of a bug.)
Need to raise a better antibody? |
Please use online Abie Pro 3.0 for
peptide antibody design.
Compare Primo to other online primer design software and find
Oligo synthesis facilities
The Electronic Protocol Book Table of contents
An electronic protocol book with 500 protocols and
100 recipes. A great quick and practical reference for bench scientists
as well as for new students. (Available for both PC and Mac.)
Get a copy
BioToolKit 300 (PC and Mac)   Order download
Primo 3.4 (PCR primer design) and Abie 3.0 (peptide antibody design)
are parts of functions included in BioToolKit 300 , a
collection of tools frequently used by bench biomedical scientists:
Primo 3.4 PCR primer design: |
Pro --- Standard PCR and RT-PCR.
Multiplex --- Multiple PCRs in one tube.
Degenerate --- Degenerate PCR for one or more genes.
Optimum --- Optimize codon usage. Gene Synthesis.
Diverse --- Most diverse regions of a family.
Unique --- Amplify one gene from a family.
MSP --- Methylation specific PCR.
Random --- Random primers for fingerprinting.
Profile --- Profile 10s-1000s of genes.
Abie Pro 3.0: Select antigenic peptide for antibody production and reduce background cross-reactions.
Centrifugation speed/force conversion for any rotor.
Molecular weight calculation for oligos, peptides, and chemicals.
Molar calculator for concentration-related calculations.
Spectrometer calculator for DNA and protein concentration.
Stock recipe calculator for tens of commonly used stock solutions.
Units conversion in 14 categories.
Master cocktail mix calculator for multiple reactions.
Clinical: time/date conversion, body-mass index, body area.
MicroHelper: Merge, filter, transform, and normalize microarray data.
Godlist Manager: Batch GenBank search for info or sequence. Generate web links to databases.
Heatmap Viewer: Display high-throughput data using colors. Save image as JPEG file for presentation.
LabLabel: Label and barcode printing
LabInventory: Practical inventory database
PrimerBase: Organize primers.
Searchable by name and sequence.
PeptideBase: Database for peptides.
GradeBook: Grade book for professor/TA
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