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FABA 2Beta --- Functional Analysis By Association
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Genes Associated With Hs.333738 BBS2
Human Bardet-Biedl syndrome 2

Query Gene:

Hs.333738 BBS2 Bardet-Biedl syndrome 2 GeneCard AmiGO Pubmed Google

Top Associated Genes:

  • Hs.370963 SYT6 Synaptotagmin VI GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.496279 MADP-1 MADP-1 protein GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.306221 ZNF326 Zinc finger protein 326 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.99819 USP16 Ubiquitin specific peptidase 16 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.533626 SECP43 TRNA selenocysteine associated protein 1 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.401537 SPPL2A Signal peptide peptidase-like 2A GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.509699 MPP5 Membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.496057 SLC9A7 Solute carrier family 9 (sodium/hydrogen exchanger), member 7 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.386467 ICAM4 Intercellular adhesion molecule 4, Landsteiner-Wiener blood group GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.98322 ZA20D1 Zinc finger, A20 domain containing 1 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.167451 KIAA0999 KIAA0999 protein GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.525536 KIAA1509 KIAA1509 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.440364 DNCI1 Dynein, cytoplasmic 1, intermediate chain 1 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.112955 NUDT5 Nudix (nucleoside diphosphate linked moiety X)-type motif 5 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.535341 Full length insert cDNA clone YS02G11
  • Hs.454528 VPS35 Vacuolar protein sorting 35 (yeast) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.470277 GALNT13 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.445512 FLJ10853 Coiled-coil domain containing 25 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.570744 Transcribed locus
  • Hs.446357 C14orf24 Chromosome 14 open reading frame 24 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.180142 CALML5 Calmodulin-like 5 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.42217 CDA08 T-cell immunomodulatory protein GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.521264 ZHX1 Zinc fingers and homeoboxes 1 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.445892 SEC22L3 SEC22 vesicle trafficking protein-like 3 (S. cerevisiae) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.497332 DKFZP564B1023 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.122186 NPHS1 Nephrosis 1, congenital, Finnish type (nephrin) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.469879 FLJ10006 Hypothetical protein LOC55677 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.563142 CDNA FLJ31508 fis, clone NT2NE2006387
  • Hs.460109 MYH11 Myosin, heavy polypeptide 11, smooth muscle GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.202577 CDNA FLJ34585 fis, clone KIDNE2008758

    Datasets Info:

    Normal Human Samples
    Dataset must contain at least one normal sample.
  • GDS1051 (13 samples) Valproic acid effect on theca cells (HG-U133B)
  • GDS1087 (30 samples) Normal tissues of diverse types (SHBA)
  • GDS1088 (11 samples) Normal tissues of diverse types (SHDP)
  • GDS1252 (26 samples) Idiopathic pulmonary fibrosis
  • GDS423 (24 samples) Normal human tissue expression profiling (HG-U95B)
  • GDS424 (24 samples) Normal human tissue expression profiling (HG-U95C)
  • GDS426 (24 samples) Normal human tissue expression profiling (HG-U95E)
  • GDS507 (17 samples) Renal clear cell carcinoma (HG-U133B)
  • GDS594 (158 samples) Large-scale analysis of the human transcriptome (GNF1b)
  • GDS651 (37 samples) Heart failure arising from different etiologies
  • GDS824 (26 samples) Cigarette smoke condensate effect on bronchial epithelial cells: time course

    Keys

  • Column: Dataset. Each dataset may contain tens to hundreds of array samples.
  • Row: Gene. The probe sequences for a gene may be different in different datasets.
  • Red color: Positive correlation, i.e., within the dataset (column) the query gene (in the title) and the gene represented in the row show positive correlations in their expressions.
  • Green color: Negative correlation, i.e., within the dataset (column) the query gene (in the title) and the gene represented in the row show negative correlations in their expressions.

    Questions about FABA?

  • Short answer: FABA is in silico two-hybrid software. It fishes for genes with correlated expressions and related functions.
  • Summary
  • User Manual (pdf)

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