Online
|
Download
|
Store
|
Contact
|
About
FABA 2Beta --- Functional Analysis By Association
FABA home   Browse   Tell a colleague   Subscribe   Login   Support

Genes Associated With Rn.3222 LOC313535
Rat Similar to prion protein interacting protein 1

Query Gene:

Rn.3222 LOC313535 Similar to prion protein interacting protein 1 GeneCard AmiGO Pubmed Google

Top Associated Genes:

  • Rn.12298 Slit3 Slit homolog 3 (Drosophila) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Rn.10958 Eef2k Eukaryotic elongation factor-2 kinase GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Rn.22518 Cav Caveolin GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Rn.41482 Transcribed locus
  • Rn.25048 Transcribed locus
  • Rn.163064 Stk17b Serine/threonine kinase 17b (apoptosis-inducing) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Rn.40201 Transcribed locus, moderately similar to XP_374095.2 PREDICTED: hypothetical protein XP_374095 [Homo sapiens]
  • Rn.14882 LOC497812 Hypothetical gene supported by NM_138881 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Rn.102447 Taf6 TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Rn.9897 Mist1 Muscle, intestine and stomach expression 1 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Rn.21448 Dna2l_predicted DNA2 DNA replication helicase 2-like (yeast) (predicted) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Rn.161828 Chst8_predicted Carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8 (predicted) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Rn.37420 Nat1 N-acetyltransferase 1 (arylamine N-acetyltransferase) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Rn.33421 RGD1309971_predicted Similar to KIAA1126 protein (predicted) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Rn.15466 Zfp574 Zinc finger protein 574 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Rn.4123 Smpx Small muscle protein, X-linked GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Rn.46439 Fkbp1b FK506 binding protein 1b GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Rn.6526 Kif1b Kinesin family member 1B GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Rn.44439 Fgf10 Fibroblast growth factor 10 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Rn.113868 Ube2d2 Ubiquitin-conjugating enzyme E2D 2 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Rn.6636 RGD1308907_predicted Similar to FLJ20689 (predicted) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Rn.46695 Nf2 Neurofibromatosis 2 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Rn.33216 Siat4b Sialyltransferase 4B (beta-galactoside alpha-2,3-sialyltransferase) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Rn.53995 Casp7 Caspase 7 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Rn.62607 Cd79b CD79B antigen GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Rn.163275 Rem2 Rad and gem related GTP binding protein 2 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Rn.92109 Farp1_predicted FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived) (predicted) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Rn.79380 Wdr44 WD repeat domain 44 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Rn.163377 Sema6a_predicted Sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A (predicted) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Rn.138713 Fscn2_predicted Fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus) (predicted) GeneCard AmiGO Pubmed Google Pubmed2 Google2

    Datasets Info:

    Rat
    Rat microarray datasets
  • GDS1054 (30 samples) Iron deficiency effect on duodenum: time course (RAE230A)
  • GDS1055 (30 samples) Iron deficiency effect on duodenum: time course (RAE230B)
  • GDS1218 (16 samples) PPARgamma overexpression and activation effect on pancreatic islets
  • GDS1251 (9 samples) Acute hypotension effect on kidneys
  • GDS1307 (10 samples) Various high fat diets effect on liver
  • GDS699 (9 samples) Spermatogonial stem cell activity time course under various culture conditions (RAE230B)
  • GDS779 (12 samples) Aerobic running capacity: expression profiling of heart ventricles from various strains (RG-U34B)
  • GDS851 (8 samples) Extraocular muscle: comparison of global and orbital layers
  • GDS954 (11 samples) Ketogenic diet effect on brain hippocampus
  • GDS964 (53 samples) Methylprednisolone effect on kidney: time course (RAE230A)
  • GDS972 (44 samples) Methylprednisolone effect on liver: time course (RAE230A)

    Keys

  • Column: Dataset. Each dataset may contain tens to hundreds of array samples.
  • Row: Gene. The probe sequences for a gene may be different in different datasets.
  • Red color: Positive correlation, i.e., within the dataset (column) the query gene (in the title) and the gene represented in the row show positive correlations in their expressions.
  • Green color: Negative correlation, i.e., within the dataset (column) the query gene (in the title) and the gene represented in the row show negative correlations in their expressions.

    Questions about FABA?

  • Short answer: FABA is in silico two-hybrid software. It fishes for genes with correlated expressions and related functions.
  • Summary
  • User Manual (pdf)

    We need your help to improve FABA.
    Please subscribe and send us your feedback.
    Thanks!


  • Copyright © 2002-2006 Chang Bioscience, Inc. All rights reserved. Terms of Services Privacy Policy