FABA 2Beta
--- Functional Analysis By Association
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Genes Associated With Rn.28442 Bbs7 Rat Bardet-Biedl syndrome 7 
Query Gene: Rn.28442 Bbs7 Bardet-Biedl syndrome 7 GeneCard AmiGO Pubmed GoogleTop Associated Genes: Rn.98846 Fga Fibrinogen, alpha polypeptide
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.5892 Hla-dmb Major histocompatibility complex, class II, DM beta
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.28195 Gch GTP cyclohydrolase 1
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.20579 Nt5c2l1_predicted 5'-nucleotidase, cytosolic II-like 1 (predicted)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.2490 Il15 Interleukin 15
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.3606 Slc25a3 Solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 3
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.9733 Kcnc2 Potassium voltage gated channel, Shaw-related subfamily, member 2
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.105677 RGD1305243_predicted Similar to hypothetical protein FLJ34389 (predicted)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.1121 Pam Peptidylglycine alpha-amidating monooxygenase
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.11408 Glp1r Glucagon-like peptide 1 receptor
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.9560 LOC294446 Similar to Myristoylated alanine-rich C-kinase substrate (MARCKS) (ACAMP-81)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.3841 Hspb1 Heat shock 27kDa protein 1
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.37733 Pde4b Phosphodiesterase 4B, cAMP specific
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.11116 Renbp Renin binding protein
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.93047 RGD1307722_predicted Similar to hypothetical protein MGC20700 (predicted)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.82692 Ces1 Carboxylesterase 1
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.110861 Ptgdr Prostaglandin D receptor
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.3869 RGD1311873 Similar to hypothetical protein FLJ14466
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.9925 Smgb Neonatal submandibular gland protein B
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.17098 Bin1 Bridging integrator 1
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.100813 Psat1 Phosphoserine aminotransferase 1
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.33815 Apob Apolipoprotein B
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.81196 PRP-2 Proline-rich protein
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.4283 Pla2g1b Phospholipase A2, group IB
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.3617 Transcribed locus
Datasets Info:Rat Rat microarray datasets GDS1035 (34 samples) Cardiac myocyte and fibroblast response to various stresses GDS1055 (30 samples) Iron deficiency effect on duodenum: time course (RAE230B) GDS1234 (8 samples) Fibroblast growth factor receptor 3 K650E mutation for type II thanatophoric dysplasia GDS1236 (8 samples) Huntingtin exon 1 protein overexpression GDS1238 (6 samples) Spinal cord contusion GDS1264 (23 samples) Left ventricular hypertrophy in spontaneously hypertensive model: time course GDS1274 (14 samples) Vitamin A deficiency effect on liver GDS1278 (9 samples) Age effect on laryngeal muscle GDS1279 (24 samples) Age effect on extraocular muscles GDS1292 (83 samples) Spinal cord injury effect on supraspinal tracts: time course (RG-U34A) GDS1301 (6 samples) Cardiovascular response to chronic voluntary exercise GDS1307 (10 samples) Various high fat diets effect on liver GDS174 (10 samples) Spermatogenesis regulation GDS238 (10 samples) Skin tumors and vitamin A supplements GDS253 (47 samples) Methylprednisolone effect on liver: time course GDS254 (16 samples) Muscle, normal extraocular, profile GDS256 (51 samples) Pharmacogenomic effect of corticosteroid in skeletal muscle GDS276 (14 samples) Muscle profiles GDS278 (36 samples) Muscle response to acute resistance exercise GDS364 (32 samples) Anesthetic effect on brain GDS366 (18 samples) Necrotizing enterocolitis development GDS399 (11 samples) Cardiac aging GDS489 (24 samples) Cardiac hypertrophy: physiologically and pathologically induced GDS508 (10 samples) Denervation effect on lacrimal gland GDS509 (36 samples) Fracture healing timecourse and the effect of age GDS526 (6 samples) Syracuse high and low avoidance learning comparison GDS599 (10 samples) Burn injury: liver metabolic and inflammatory response GDS621 (36 samples) Extraocular and hindlimb muscle development GDS63 (90 samples) Spinal cord injury and regeneration time course: at T9 (RG-U34A) GDS654 (12 samples) Cardiac hypertrophy induced by exercise GDS656 (18 samples) Retina injury response time course GDS657 (8 samples) Ligament healing and effect of hindlimb unloading GDS699 (9 samples) Spermatogonial stem cell activity time course under various culture conditions (RAE230B) GDS769 (8 samples) Glioma cell migration: comparison of fast and slow invading cells GDS778 (12 samples) Aerobic running capacity: expression profiling of heart ventricles from various strains (RG-U34A) GDS808 (30 samples) Heart ischemia protection: comparison of pharmacologic and ischemic preconditioning GDS869 (55 samples) Spinal cord injury and regeneration time course: below T9 (RG-U34A) GDS872 (52 samples) Spinal cord injury and regeneration time course: above T9 (RG-U34A) GDS955 (30 samples) Early-life kainite-induced seizure effect on brain hippocampus: time course GDS956 (15 samples) Dopamine neurons from substantia nigra pars compacta and ventral tegmental area GDS965 (10 samples) Methylprednisolone effect on kidney: time course (RG-U34A)Keys
Column: Dataset. Each dataset may contain tens to hundreds of array samples.
Row: Gene. The probe sequences for a gene may be different in different datasets.
Red color: Positive correlation, i.e., within the dataset (column) the query gene (in the title) and the gene represented in the row show positive correlations in their expressions.
Green color: Negative correlation, i.e., within the dataset (column) the query gene (in the title) and the gene represented in the row show negative correlations in their expressions.
Questions about FABA?
Short answer: FABA is in silico two-hybrid software. It fishes for genes with correlated expressions and related functions.
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