FABA 2Beta
--- Functional Analysis By Association
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Genes Associated With Rn.18930 Hps4_predicted Rat Hermansky-Pudlak syndrome 4 (predicted) 
Query Gene: Rn.18930 Hps4_predicted Hermansky-Pudlak syndrome 4 (predicted) GeneCard AmiGO Pubmed GoogleTop Associated Genes: Rn.59788 Trpc5 Transient receptor potential cation channel, subfamily C, member 5
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.10532 Npy5r Neuropeptide Y receptor Y5
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.13745 Camta2_predicted Calmodulin binding transcription activator 2 (predicted)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.12899 RGD735029 SEL1 domain containing protein RGD735029
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.98278 Transcribed locus, strongly similar to NP_758483.1 MAP/microtubule affinity-regulating kinase 4 [Mus musculus]
Rn.625 Gstm1 Glutathione S-transferase, mu 1
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.63865 Cdkn2c Cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.104002 Pcsk5 Proprotein convertase subtilisin/kexin type 5
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.43215 Znf444_predicted Zinc finger protein 444 (predicted)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.64787 RGD1307966_predicted Similar to hypothetical protein (predicted)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.10733 Cngb1 Cyclic nucleotide gated channel beta 1
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.140802 RGD1309383 Similar to RIKEN cDNA G630055P03 gene
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.135879 Dibd1_predicted Disrupted in bipolar affective disorder 1 (predicted)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.163747 Transcribed locus
Rn.23477 RGD1308908_predicted Similar to KIAA1440 protein (predicted)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.162550 Rasgrf2 RAS protein-specific guanine nucleotide-releasing factor 2
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.11297 Npr3 Natriuretic peptide receptor 3
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.10013 Atp1a4 ATPase, Na+/K+ transporting, alpha 4 polypeptide
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.40979 Xrcc4 X-ray repair cross complementing protein 4
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.11805 Csnk1e Casein kinase 1, epsilon
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.1501 RGD1559787_predicted Similar to serum response factor (predicted)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.23162 RGD1561932_predicted Similar to novel protein (predicted)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.107364 Prss8 Protease, serine, 8 (prostasin)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.12328 Mfap4 Microfibrillar-associated protein 4
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.8976 Transcribed locus
Rn.60152 Etfb Electron-transfer-flavoprotein, beta polypeptide
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.7990 Lmbrd1 LMBR1 domain containing 1
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.98315 RGD1306721 Similar to helicase-like protein NHL isoform 2
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.17691 Hps1 Hermansky-Pudlak syndrome 1 homolog (human)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.12987 RGD1310414 Similar to hypothetical protein FLJ23263
GeneCard AmiGO Pubmed Google Pubmed2 Google2  Datasets Info:Rat Rat microarray datasets GDS1054 (30 samples) Iron deficiency effect on duodenum: time course (RAE230A) GDS1055 (30 samples) Iron deficiency effect on duodenum: time course (RAE230B) GDS1218 (16 samples) PPARgamma overexpression and activation effect on pancreatic islets GDS1251 (9 samples) Acute hypotension effect on kidneys GDS1280 (18 samples) Age effect on central and peripheral nervous systems GDS1307 (10 samples) Various high fat diets effect on liver GDS698 (9 samples) Spermatogonial stem cell activity time course under various culture conditions (RAE230A) GDS699 (9 samples) Spermatogonial stem cell activity time course under various culture conditions (RAE230B) GDS780 (12 samples) Aerobic running capacity: expression profiling of heart ventricles from various strains (RG-U34C) GDS851 (8 samples) Extraocular muscle: comparison of global and orbital layers GDS871 (43 samples) Spinal cord injury and regeneration time course: below T9 (RG-U34C) GDS874 (48 samples) Spinal cord injury and regeneration time course: above T9 (RG-U34C) GDS905 (25 samples) Pancreatic beta cell lines overexpressing wild type MODY genes or mutant HNF1b alleles GDS954 (11 samples) Ketogenic diet effect on brain hippocampus GDS964 (53 samples) Methylprednisolone effect on kidney: time course (RAE230A) GDS972 (44 samples) Methylprednisolone effect on liver: time course (RAE230A)Keys
Column: Dataset. Each dataset may contain tens to hundreds of array samples.
Row: Gene. The probe sequences for a gene may be different in different datasets.
Red color: Positive correlation, i.e., within the dataset (column) the query gene (in the title) and the gene represented in the row show positive correlations in their expressions.
Green color: Negative correlation, i.e., within the dataset (column) the query gene (in the title) and the gene represented in the row show negative correlations in their expressions.
Questions about FABA?
Short answer: FABA is in silico two-hybrid software. It fishes for genes with correlated expressions and related functions.
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