FABA 2Beta
--- Functional Analysis By Association
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Genes Associated With Rn.18732 Tssc4 Rat Tumor-suppressing subchromosomal transferable fragment 4 
Query Gene: Rn.18732 Tssc4 Tumor-suppressing subchromosomal transferable fragment 4 GeneCard AmiGO Pubmed GoogleTop Associated Genes: Rn.2438 RGD1565597_predicted Similar to RIKEN cDNA 2210421G13 (predicted)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.44692 Pla2g6 Phospholipase A2, group VI
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.3360 Trim47_predicted Tripartite motif protein 47 (predicted)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.162014 RGD1562494_predicted Similar to keratin 6 alpha (predicted)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.37385 Accn2 Amiloride-sensitive cation channel 2, neuronal
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.147642 Akap6 A kinase (PRKA) anchor protein 6
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.48955 Transcribed locus
Rn.10739 Cacnb2 Calcium channel, voltage-dependent, beta 2 subunit
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.37575 Tpm3 Tropomyosin 3, gamma
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.163306 Msra Methionine sulfoxide reductase A
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.161948 Rims2 Regulating synaptic membrane exocytosis 2
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.3039 Enc1 Ectodermal-neural cortex 1
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.10398 Prkch Protein kinase C, eta
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.9262 Cdc20 Cell division cycle 20 homolog (S. cerevisiae)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.162481 Brsk2 Brain serine/threonine kinase 2
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.88169 Scarb1 Scavenger receptor class B, member 1
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.91185 LOC360443 Hypothetical gene supported by NM_012720
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.105740 Transcribed locus, strongly similar to XP_217044.2 PREDICTED: similar to lipocalin-interacting membrane receptor [Rattus norvegicus]
Rn.4050 Zfp216_predicted Zinc finger protein 216 (predicted)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.81026 Slc26a3 Solute carrier family 26, member 3
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.25030 Transcribed locus, strongly similar to NP_954513.1 secreted and transmembrane 1 [Rattus norvegicus]
Rn.162741 Podxl Podocalyxin-like
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.16664 Fen1 Flap structure-specific endonuclease 1
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.89069 Cit Citron
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.162227 Ugcgl1 UDP-glucose ceramide glucosyltransferase-like 1
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.60476 Snip SNAP25-interacting protein
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.48863 Lbp Lipopolysaccharide binding protein
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.60 Ak3 Adenylate kinase 3
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.17150 RGD1564625_predicted Similar to transmembrane protein TM9SF3 (predicted)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.9852 Gpx6 Glutathione peroxidase 6
GeneCard AmiGO Pubmed Google Pubmed2 Google2Datasets Info:Rat Rat microarray datasets GDS1018 (49 samples) Brain hippocampal neurons response to brief preconditioning seizures GDS1054 (30 samples) Iron deficiency effect on duodenum: time course (RAE230A) GDS1218 (16 samples) PPARgamma overexpression and activation effect on pancreatic islets GDS1251 (9 samples) Acute hypotension effect on kidneys GDS1273 (35 samples) Amoxicillin effect on small intestine and colon development: time course GDS1280 (18 samples) Age effect on central and peripheral nervous systems GDS1307 (10 samples) Various high fat diets effect on liver GDS698 (9 samples) Spermatogonial stem cell activity time course under various culture conditions (RAE230A) GDS779 (12 samples) Aerobic running capacity: expression profiling of heart ventricles from various strains (RG-U34B) GDS780 (12 samples) Aerobic running capacity: expression profiling of heart ventricles from various strains (RG-U34C) GDS851 (8 samples) Extraocular muscle: comparison of global and orbital layers GDS905 (25 samples) Pancreatic beta cell lines overexpressing wild type MODY genes or mutant HNF1b alleles GDS954 (11 samples) Ketogenic diet effect on brain hippocampus GDS964 (53 samples) Methylprednisolone effect on kidney: time course (RAE230A) GDS972 (44 samples) Methylprednisolone effect on liver: time course (RAE230A)Keys
Column: Dataset. Each dataset may contain tens to hundreds of array samples.
Row: Gene. The probe sequences for a gene may be different in different datasets.
Red color: Positive correlation, i.e., within the dataset (column) the query gene (in the title) and the gene represented in the row show positive correlations in their expressions.
Green color: Negative correlation, i.e., within the dataset (column) the query gene (in the title) and the gene represented in the row show negative correlations in their expressions.
Questions about FABA?
Short answer: FABA is in silico two-hybrid software. It fishes for genes with correlated expressions and related functions.
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