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FABA 2Beta --- Functional Analysis By Association
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Genes Associated With Hs.233398 BBS5
Human Bardet-Biedl syndrome 5

Query Gene:

Hs.233398 BBS5 Bardet-Biedl syndrome 5 GeneCard AmiGO Pubmed Google

Top Associated Genes:

  • Hs.120277 MGC27085 Leucine rich repeat containing 34 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.175534 ELP4 Elongation protein 4 homolog (S. cerevisiae) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.487458 TRIAD3 TRIAD3 protein GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.152385 FLJ10980 KIAA1370 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.128011 Transcribed locus
  • Hs.384043 Clone IMAGE:111510 mRNA sequence
  • Hs.514356 FLJ11710 Hypothetical protein FLJ11710 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.474049 PCBP3 Poly(rC) binding protein 3 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.224152 TUBGCP3 Tubulin, gamma complex associated protein 3 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.40582 CDC14B CDC14 cell division cycle 14 homolog B (S. cerevisiae) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.208358 C21orf63 Chromosome 21 open reading frame 63 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.189641 SEC24D SEC24 related gene family, member D (S. cerevisiae) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.432364 LOC375748 RAD26L hypothetical protein GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.573360 Transcribed locus
  • Hs.152812 Transcribed locus
  • Hs.432566 Transcribed locus, weakly similar to XP_518535.1 PREDICTED: similar to dJ108C2.1.4 (MCM3 minichromosome maintenance deficient 3 (S. cerevisiae), variant 4) [Pan troglodytes]
  • Hs.427229 Transcribed locus
  • Hs.446271 Hypothetical gene supported by AK091718
  • Hs.169943 DEPDC2 DEP domain containing 2 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.207180 Transcribed locus
  • Hs.124554 Transcribed locus
  • Hs.489603 ATXN7L1 Ataxin 7-like 4 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.125348 C4orf8 Chromosome 4 open reading frame 8 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.211021 AMMECR1 Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region, gene 1 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.556496 CDNA FLJ14635 fis, clone NT2RP2001196
  • Hs.76253 ATXN2 Ataxin 2 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.370510 IGSF4 Immunoglobulin superfamily, member 4 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.25555 Transcribed locus
  • Hs.512463 Similar to CDNA sequence BC004853
  • Hs.17731 FLJ12892 Coiled-coil domain containing 14 GeneCard AmiGO Pubmed Google Pubmed2 Google2

    Datasets Info:

    Normal Human Samples
    Dataset must contain at least one normal sample.
  • GDS1051 (13 samples) Valproic acid effect on theca cells (HG-U133B)
  • GDS1087 (30 samples) Normal tissues of diverse types (SHBA)
  • GDS1088 (11 samples) Normal tissues of diverse types (SHDP)
  • GDS424 (24 samples) Normal human tissue expression profiling (HG-U95C)
  • GDS425 (24 samples) Normal human tissue expression profiling (HG-U95D)
  • GDS426 (24 samples) Normal human tissue expression profiling (HG-U95E)
  • GDS507 (17 samples) Renal clear cell carcinoma (HG-U133B)
  • GDS651 (37 samples) Heart failure arising from different etiologies

    Keys

  • Column: Dataset. Each dataset may contain tens to hundreds of array samples.
  • Row: Gene. The probe sequences for a gene may be different in different datasets.
  • Red color: Positive correlation, i.e., within the dataset (column) the query gene (in the title) and the gene represented in the row show positive correlations in their expressions.
  • Green color: Negative correlation, i.e., within the dataset (column) the query gene (in the title) and the gene represented in the row show negative correlations in their expressions.

    Questions about FABA?

  • Short answer: FABA is in silico two-hybrid software. It fishes for genes with correlated expressions and related functions.
  • Summary
  • User Manual (pdf)

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