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FABA 2Beta --- Functional Analysis By Association
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Genes Associated With Hs.208681 BBS4
Human Bardet-Biedl syndrome 4

Query Gene:

Hs.208681 BBS4 Bardet-Biedl syndrome 4 GeneCard AmiGO Pubmed Google

Top Associated Genes:

  • Hs.484371 MAPK9 Mitogen-activated protein kinase 9 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.189075 PTK9 PTK9 protein tyrosine kinase 9 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.99855 FPRL1 Formyl peptide receptor-like 1 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.173859 FZD7 Frizzled homolog 7 (Drosophila) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.429052 ITGB1 Integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.16230 FLJ20619 Tetratricopeptide repeat domain 22 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.503510 EED Embryonic ectoderm development GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.166003 ADAM7 ADAM metallopeptidase domain 7 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.479911 MED18 Mediator of RNA polymerase II transcription, subunit 18 homolog (yeast) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.567443 CNTNAP2 Contactin associated protein-like 2 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.13370 UNC50 Unc-50 homolog (C. elegans) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.479439 PCDH7 BH-protocadherin (brain-heart) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.530940 BRAP BRCA1 associated protein GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.532399 KIAA0663 Zinc finger CCCH-type containing 11A GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.278457 KIR3DL1 Killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 1 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.309288 CUGBP2 CUG triplet repeat, RNA binding protein 2 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.377070 GRIA3 Glutamate receptor, ionotrophic, AMPA 3 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.558350 KCNJ5 Potassium inwardly-rectifying channel, subfamily J, member 5 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.514375 LOC440712 Chromosome 1 open reading frame 186 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.512001 GPLD1 Glycosylphosphatidylinositol specific phospholipase D1 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.277624 ZZEF1 Zinc finger, ZZ-type with EF-hand domain 1 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.7089 INSIG2 Insulin induced gene 2 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.234785 CNGA3 Cyclic nucleotide gated channel alpha 3 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.274150 PIWIL2 Piwi-like 2 (Drosophila) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.444304 PFKFB1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.323858 TRIM58 Tripartite motif-containing 58 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.370147 FLJ22490 Centrosome and spindle pole associated protein 1 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.487447 FBXL18 F-box and leucine-rich repeat protein 18 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.534169 HSPA14 Heat shock 70kDa protein 14 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.268787 ARIH1 Ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila) GeneCard AmiGO Pubmed Google Pubmed2 Google2

    Datasets Info:

    Normal Human Samples
    Dataset must contain at least one normal sample.
  • GDS1050 (13 samples) Valproic acid effect on theca cells (HG-U133A)
  • GDS1087 (30 samples) Normal tissues of diverse types (SHBA)
  • GDS1088 (11 samples) Normal tissues of diverse types (SHDP)
  • GDS1096 (36 samples) Normal tissues of various types
  • GDS1304 (11 samples) Cigarette smoking effect on small airway epithelium
  • GDS1312 (10 samples) Squamous lung cancer
  • GDS1321 (24 samples) Barrett's metaplasia progression to adenocarcinoma
  • GDS261 (12 samples) Asthma exacerbatory factors
  • GDS422 (24 samples) Normal human tissue expression profiling (HG-U95A)
  • GDS423 (24 samples) Normal human tissue expression profiling (HG-U95B)
  • GDS426 (24 samples) Normal human tissue expression profiling (HG-U95E)
  • GDS484 (10 samples) Uterine fibroid and normal myometrial tissue
  • GDS505 (17 samples) Renal clear cell carcinoma (HG-U133A)
  • GDS511 (14 samples) Postmortem skeletal muscle
  • GDS596 (158 samples) Large-scale analysis of the human transcriptome (HG-U133A)
  • GDS619 (91 samples) Lung neuroendocrine tumor classification
  • GDS651 (37 samples) Heart failure arising from different etiologies
  • GDS707 (30 samples) Aging brain: frontal cortex expression profiles at various ages

    Keys

  • Column: Dataset. Each dataset may contain tens to hundreds of array samples.
  • Row: Gene. The probe sequences for a gene may be different in different datasets.
  • Red color: Positive correlation, i.e., within the dataset (column) the query gene (in the title) and the gene represented in the row show positive correlations in their expressions.
  • Green color: Negative correlation, i.e., within the dataset (column) the query gene (in the title) and the gene represented in the row show negative correlations in their expressions.

    Questions about FABA?

  • Short answer: FABA is in silico two-hybrid software. It fishes for genes with correlated expressions and related functions.
  • Summary
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