Genes Associated With Rn.107979 Ckn1_predicted
Rat Cockayne syndrome 1 (classical) (predicted)

Query Gene: Rn.107979 Ckn1_predicted Cockayne syndrome 1 (classical) (predicted) GeneCard AmiGO Pubmed Google Top Associated Genes: Rn.90166 Ptprc Protein tyrosine phosphatase, receptor type, C GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.37500 Homer1 Homer homolog 1 (Drosophila) GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.10011 Vipr2 Vasoactive intestinal peptide receptor 2 GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.10580 Acvr1c Activin receptor-like kinase 7 GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.24240 Acvr2b Activin receptor IIB GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.11337 Cd5 CD5 antigen GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.10361 Ptger3 Prostaglandin E receptor 3 (subtype EP3) GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.118681 Igf2 Insulin-like growth factor 2 GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.124931 Transcribed locus Rn.48866 Transcribed locus Rn.11378 C3 Complement component 3 GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.2490 Il15 Interleukin 15 GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.2305 Atp2a2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.20733 Prpg1 Proline-rich proteoglycan 1 GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.136691 RGD1563746_predicted Similar to nuclear protein with a coiled coil-4 domain of bilaterial origin like (3L720) (predicted) GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.136393 Transcribed locus Rn.90152 Plod3 Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.82709 Bcl2l11 BCL2-like 11 (apoptosis facilitator) GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.93735 Arf1 ADP-ribosylation factor 1 GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.35223 Sla Src-like adaptor GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.87540 Tpm1 Tropomyosin 1, alpha GeneCard AmiGO Pubmed Google Pubmed2 Google2 Rn.10495 Abcc1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 GeneCard AmiGO Pubmed Google Pubmed2 Google2 Datasets Info: Rat Rat microarray datasets GDS1218 (16 samples) PPARgamma overexpression and activation effect on pancreatic islets GDS1234 (8 samples) Fibroblast growth factor receptor 3 K650E mutation for type II thanatophoric dysplasia GDS1236 (8 samples) Huntingtin exon 1 protein overexpression GDS1251 (9 samples) Acute hypotension effect on kidneys GDS1264 (23 samples) Left ventricular hypertrophy in spontaneously hypertensive model: time course GDS1274 (14 samples) Vitamin A deficiency effect on liver GDS1278 (9 samples) Age effect on laryngeal muscle GDS1279 (24 samples) Age effect on extraocular muscles GDS1292 (83 samples) Spinal cord injury effect on supraspinal tracts: time course (RG-U34A) GDS1301 (6 samples) Cardiovascular response to chronic voluntary exercise GDS174 (10 samples) Spermatogenesis regulation GDS238 (10 samples) Skin tumors and vitamin A supplements GDS253 (47 samples) Methylprednisolone effect on liver: time course GDS256 (51 samples) Pharmacogenomic effect of corticosteroid in skeletal muscle GDS276 (14 samples) Muscle profiles GDS278 (36 samples) Muscle response to acute resistance exercise GDS366 (18 samples) Necrotizing enterocolitis development GDS399 (11 samples) Cardiac aging GDS489 (24 samples) Cardiac hypertrophy: physiologically and pathologically induced GDS508 (10 samples) Denervation effect on lacrimal gland GDS526 (6 samples) Syracuse high and low avoidance learning comparison GDS599 (10 samples) Burn injury: liver metabolic and inflammatory response GDS621 (36 samples) Extraocular and hindlimb muscle development GDS654 (12 samples) Cardiac hypertrophy induced by exercise GDS657 (8 samples) Ligament healing and effect of hindlimb unloading GDS698 (9 samples) Spermatogonial stem cell activity time course under various culture conditions (RAE230A) GDS726 (6 samples) Renin-angiotensin system inhibition effect on cerebral capillaries GDS769 (8 samples) Glioma cell migration: comparison of fast and slow invading cells GDS778 (12 samples) Aerobic running capacity: expression profiling of heart ventricles from various strains (RG-U34A) GDS808 (30 samples) Heart ischemia protection: comparison of pharmacologic and ischemic preconditioning GDS851 (8 samples) Extraocular muscle: comparison of global and orbital layers GDS877 (11 samples) Alveolar type I and type II cell comparison GDS905 (25 samples) Pancreatic beta cell lines overexpressing wild type MODY genes or mutant HNF1b alleles GDS954 (11 samples) Ketogenic diet effect on brain hippocampus GDS955 (30 samples) Early-life kainite-induced seizure effect on brain hippocampus: time course GDS956 (15 samples) Dopamine neurons from substantia nigra pars compacta and ventral tegmental area GDS965 (10 samples) Methylprednisolone effect on kidney: time course (RG-U34A) GDS972 (44 samples) Methylprednisolone effect on liver: time course (RAE230A) Keys Column: Dataset. Each dataset may contain tens to hundreds of array samples. Row: Gene. The probe sequences for a gene may be different in different datasets. Red color: Positive correlation, i.e., within the dataset (column) the query gene (in the title) and the gene represented in the row show positive correlations in their expressions. Green color: Negative correlation, i.e., within the dataset (column) the query gene (in the title) and the gene represented in the row show negative correlations in their expressions. Questions about FABA? Short answer: FABA is in silico two-hybrid software. It fishes for genes with correlated expressions and related functions. Summary User Manual (pdf) We need your help to improve FABA. Please subscribe and send us your feedback. Thanks!