FABA 2Beta
--- Functional Analysis By Association
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Genes Associated With Hs.184720 ALMS1 Human Alstrom syndrome 1 
Query Gene: Hs.184720 ALMS1 Alstrom syndrome 1 GeneCard AmiGO Pubmed GoogleTop Associated Genes: Hs.108332 UBE2D2 Ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.437211 PDE4C Phosphodiesterase 4C, cAMP-specific (phosphodiesterase E1 dunce homolog, Drosophila)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.86337 POLR1B Polymerase (RNA) I polypeptide B, 128kDa
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.432121 PRDX2 Peroxiredoxin 2
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.252820 PGF Placental growth factor, vascular endothelial growth factor-related protein
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.444329 GPC6 Glypican 6
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.467236 ZNF160 Zinc finger protein 160
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.568097 FLJ42393 FLJ42393 protein
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.493919 MPZL1 Myelin protein zero-like 1
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.507971 LRCH1 Leucine-rich repeats and calponin homology (CH) domain containing 1
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.459106 OAZIN Antizyme inhibitor 1
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.134074 SLC35E1 Solute carrier family 35, member E1
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.20107 KNS2 Kinesin 2
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.165736 FLJ14888 WD repeat domain 73
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.334603 REPS1 RALBP1 associated Eps domain containing 1
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.14347 C15orf25 Centrosomal protein 27kDa
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.469925 FLJ14346 Hypothetical protein FLJ14346
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.118722 FUT8 Fucosyltransferase 8 (alpha (1,6) fucosyltransferase)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.288793 FBXW12 F-box and WD-40 domain protein 12
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.159799 THRAP2 Thyroid hormone receptor associated protein 2
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.256667 PDK2 Pyruvate dehydrogenase kinase, isozyme 2
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.435771 API5 Apoptosis inhibitor 5
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.29173 SSH3 Slingshot homolog 3 (Drosophila)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.435938 MAN1A2 Mannosidase, alpha, class 1A, member 2
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.213198 PSPC1 Paraspeckle component 1
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.445000 PTGER3 Prostaglandin E receptor 3 (subtype EP3)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.464184 SEC14L1 SEC14-like 1 (S. cerevisiae)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.355934 SFPQ Splicing factor proline/glutamine-rich (polypyrimidine tract binding protein associated)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.533526 ATRX Alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.518003 MRNA; cDNA DKFZp564E233 (from clone DKFZp564E233)
Datasets Info:Normal Human Samples Dataset must contain at least one normal sample. GDS1050 (13 samples) Valproic acid effect on theca cells (HG-U133A) GDS1051 (13 samples) Valproic acid effect on theca cells (HG-U133B) GDS1087 (30 samples) Normal tissues of diverse types (SHBA) GDS1088 (11 samples) Normal tissues of diverse types (SHDP) GDS1096 (36 samples) Normal tissues of various types GDS1252 (26 samples) Idiopathic pulmonary fibrosis GDS1304 (11 samples) Cigarette smoking effect on small airway epithelium GDS1312 (10 samples) Squamous lung cancer GDS1321 (24 samples) Barrett's metaplasia progression to adenocarcinoma GDS261 (12 samples) Asthma exacerbatory factors GDS422 (24 samples) Normal human tissue expression profiling (HG-U95A) GDS424 (24 samples) Normal human tissue expression profiling (HG-U95C) GDS426 (24 samples) Normal human tissue expression profiling (HG-U95E) GDS484 (10 samples) Uterine fibroid and normal myometrial tissue GDS505 (17 samples) Renal clear cell carcinoma (HG-U133A) GDS507 (17 samples) Renal clear cell carcinoma (HG-U133B) GDS511 (14 samples) Postmortem skeletal muscle GDS651 (37 samples) Heart failure arising from different etiologies GDS707 (30 samples) Aging brain: frontal cortex expression profiles at various ages GDS963 (36 samples) Macular degeneration and dermal fibroblast response to sublethal oxidative stressKeys
Column: Dataset. Each dataset may contain tens to hundreds of array samples.
Row: Gene. The probe sequences for a gene may be different in different datasets.
Red color: Positive correlation, i.e., within the dataset (column) the query gene (in the title) and the gene represented in the row show positive correlations in their expressions.
Green color: Negative correlation, i.e., within the dataset (column) the query gene (in the title) and the gene represented in the row show negative correlations in their expressions.
Questions about FABA?
Short answer: FABA is in silico two-hybrid software. It fishes for genes with correlated expressions and related functions.
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