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FABA 2Beta --- Functional Analysis By Association
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Genes Associated With Hs.184720 ALMS1
Human Alstrom syndrome 1

Query Gene:

Hs.184720 ALMS1 Alstrom syndrome 1 GeneCard AmiGO Pubmed Google

Top Associated Genes:

  • Hs.108332 UBE2D2 Ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.437211 PDE4C Phosphodiesterase 4C, cAMP-specific (phosphodiesterase E1 dunce homolog, Drosophila) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.86337 POLR1B Polymerase (RNA) I polypeptide B, 128kDa GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.432121 PRDX2 Peroxiredoxin 2 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.252820 PGF Placental growth factor, vascular endothelial growth factor-related protein GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.444329 GPC6 Glypican 6 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.467236 ZNF160 Zinc finger protein 160 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.568097 FLJ42393 FLJ42393 protein GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.493919 MPZL1 Myelin protein zero-like 1 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.507971 LRCH1 Leucine-rich repeats and calponin homology (CH) domain containing 1 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.459106 OAZIN Antizyme inhibitor 1 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.134074 SLC35E1 Solute carrier family 35, member E1 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.20107 KNS2 Kinesin 2 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.165736 FLJ14888 WD repeat domain 73 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.334603 REPS1 RALBP1 associated Eps domain containing 1 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.14347 C15orf25 Centrosomal protein 27kDa GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.469925 FLJ14346 Hypothetical protein FLJ14346 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.118722 FUT8 Fucosyltransferase 8 (alpha (1,6) fucosyltransferase) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.288793 FBXW12 F-box and WD-40 domain protein 12 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.159799 THRAP2 Thyroid hormone receptor associated protein 2 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.256667 PDK2 Pyruvate dehydrogenase kinase, isozyme 2 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.435771 API5 Apoptosis inhibitor 5 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.29173 SSH3 Slingshot homolog 3 (Drosophila) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.435938 MAN1A2 Mannosidase, alpha, class 1A, member 2 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.213198 PSPC1 Paraspeckle component 1 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.445000 PTGER3 Prostaglandin E receptor 3 (subtype EP3) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.464184 SEC14L1 SEC14-like 1 (S. cerevisiae) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.355934 SFPQ Splicing factor proline/glutamine-rich (polypyrimidine tract binding protein associated) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.533526 ATRX Alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.518003 MRNA; cDNA DKFZp564E233 (from clone DKFZp564E233)

    Datasets Info:

    Normal Human Samples
    Dataset must contain at least one normal sample.
  • GDS1050 (13 samples) Valproic acid effect on theca cells (HG-U133A)
  • GDS1051 (13 samples) Valproic acid effect on theca cells (HG-U133B)
  • GDS1087 (30 samples) Normal tissues of diverse types (SHBA)
  • GDS1088 (11 samples) Normal tissues of diverse types (SHDP)
  • GDS1096 (36 samples) Normal tissues of various types
  • GDS1252 (26 samples) Idiopathic pulmonary fibrosis
  • GDS1304 (11 samples) Cigarette smoking effect on small airway epithelium
  • GDS1312 (10 samples) Squamous lung cancer
  • GDS1321 (24 samples) Barrett's metaplasia progression to adenocarcinoma
  • GDS261 (12 samples) Asthma exacerbatory factors
  • GDS422 (24 samples) Normal human tissue expression profiling (HG-U95A)
  • GDS424 (24 samples) Normal human tissue expression profiling (HG-U95C)
  • GDS426 (24 samples) Normal human tissue expression profiling (HG-U95E)
  • GDS484 (10 samples) Uterine fibroid and normal myometrial tissue
  • GDS505 (17 samples) Renal clear cell carcinoma (HG-U133A)
  • GDS507 (17 samples) Renal clear cell carcinoma (HG-U133B)
  • GDS511 (14 samples) Postmortem skeletal muscle
  • GDS651 (37 samples) Heart failure arising from different etiologies
  • GDS707 (30 samples) Aging brain: frontal cortex expression profiles at various ages
  • GDS963 (36 samples) Macular degeneration and dermal fibroblast response to sublethal oxidative stress

    Keys

  • Column: Dataset. Each dataset may contain tens to hundreds of array samples.
  • Row: Gene. The probe sequences for a gene may be different in different datasets.
  • Red color: Positive correlation, i.e., within the dataset (column) the query gene (in the title) and the gene represented in the row show positive correlations in their expressions.
  • Green color: Negative correlation, i.e., within the dataset (column) the query gene (in the title) and the gene represented in the row show negative correlations in their expressions.

    Questions about FABA?

  • Short answer: FABA is in silico two-hybrid software. It fishes for genes with correlated expressions and related functions.
  • Summary
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