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FABA 2Beta --- Functional Analysis By Association
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Genes Associated With Hs.181272 PKD2
Human Polycystic kidney disease 2 (autosomal dominant)

Query Gene:

Hs.181272 PKD2 Polycystic kidney disease 2 (autosomal dominant) GeneCard AmiGO Pubmed Google

Top Associated Genes:

  • Hs.500842 MGEA5 Meningioma expressed antigen 5 (hyaluronidase) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.363558 NS3TP2 GRAM domain containing 3 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.42217 CDA08 T-cell immunomodulatory protein GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.527348 AKAP9 A kinase (PRKA) anchor protein (yotiao) 9 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.154163 HRMT1L1 HMT1 hnRNP methyltransferase-like 1 (S. cerevisiae) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.37058 CALCA Calcitonin/calcitonin-related polypeptide, alpha GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.558445 SSX3 Synovial sarcoma, X breakpoint 3 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.409210 DZIP3 Zinc finger DAZ interacting protein 3 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.479693 SFRS11 Splicing factor, arginine/serine-rich 11 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.533855 UPF3A UPF3 regulator of nonsense transcripts homolog A (yeast) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.4014 ZDHHC17 Zinc finger, DHHC-type containing 17 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.480116 WDFY3 WD repeat and FYVE domain containing 3 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.130031 TRIO Triple functional domain (PTPRF interacting) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.507475 RFC1 Replication factor C (activator 1) 1, 145kDa GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.445019 ZNF84 Zinc finger protein 84 (HPF2) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.99819 USP16 Ubiquitin specific peptidase 16 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.477009 USP24 Ubiquitin specific peptidase 24 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.567354 UBE3A Ubiquitin protein ligase E3A (human papilloma virus E6-associated protein, Angelman syndrome) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.268939 MATR3 Matrin 3 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.435765 ENPEP Glutamyl aminopeptidase (aminopeptidase A) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.380774 DDX3X DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.409602 SULF1 Sulfatase 1 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.357637 EXTL2 Exostoses (multiple)-like 2 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.210995 CA12 Carbonic anhydrase XII GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.435267 ATF1 Activating transcription factor 1 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.130491 MAP4K5 Mitogen-activated protein kinase kinase kinase kinase 5 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.9333 PDE8A Phosphodiesterase 8A GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.154224 CFHL1 Complement factor H-related 1 pseudogene GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.369168 SCFD1 Sec1 family domain containing 1 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.23581 LEPR Leptin receptor GeneCard AmiGO Pubmed Google Pubmed2 Google2

    Datasets Info:

    Normal Human Samples
    Dataset must contain at least one normal sample.
  • GDS1050 (13 samples) Valproic acid effect on theca cells (HG-U133A)
  • GDS1051 (13 samples) Valproic acid effect on theca cells (HG-U133B)
  • GDS1087 (30 samples) Normal tissues of diverse types (SHBA)
  • GDS1096 (36 samples) Normal tissues of various types
  • GDS1252 (26 samples) Idiopathic pulmonary fibrosis
  • GDS1304 (11 samples) Cigarette smoking effect on small airway epithelium
  • GDS1312 (10 samples) Squamous lung cancer
  • GDS261 (12 samples) Asthma exacerbatory factors
  • GDS422 (24 samples) Normal human tissue expression profiling (HG-U95A)
  • GDS424 (24 samples) Normal human tissue expression profiling (HG-U95C)
  • GDS425 (24 samples) Normal human tissue expression profiling (HG-U95D)
  • GDS426 (24 samples) Normal human tissue expression profiling (HG-U95E)
  • GDS484 (10 samples) Uterine fibroid and normal myometrial tissue
  • GDS505 (17 samples) Renal clear cell carcinoma (HG-U133A)
  • GDS507 (17 samples) Renal clear cell carcinoma (HG-U133B)
  • GDS511 (14 samples) Postmortem skeletal muscle
  • GDS596 (158 samples) Large-scale analysis of the human transcriptome (HG-U133A)
  • GDS619 (91 samples) Lung neuroendocrine tumor classification
  • GDS651 (37 samples) Heart failure arising from different etiologies
  • GDS670 (15 samples) Emphysema lung tissue expression profiling
  • GDS707 (30 samples) Aging brain: frontal cortex expression profiles at various ages
  • GDS781 (10 samples) CD14 cells from granulocyte colony stimulating factor mobilized peripheral blood: expression profile
  • GDS824 (26 samples) Cigarette smoke condensate effect on bronchial epithelial cells: time course
  • GDS963 (36 samples) Macular degeneration and dermal fibroblast response to sublethal oxidative stress

    Keys

  • Column: Dataset. Each dataset may contain tens to hundreds of array samples.
  • Row: Gene. The probe sequences for a gene may be different in different datasets.
  • Red color: Positive correlation, i.e., within the dataset (column) the query gene (in the title) and the gene represented in the row show positive correlations in their expressions.
  • Green color: Negative correlation, i.e., within the dataset (column) the query gene (in the title) and the gene represented in the row show negative correlations in their expressions.

    Questions about FABA?

  • Short answer: FABA is in silico two-hybrid software. It fishes for genes with correlated expressions and related functions.
  • Summary
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