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FABA 2Beta --- Functional Analysis By Association
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Genes Associated With Hs.25960 MYCN
Human V-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)

Query Gene:

Hs.25960 MYCN V-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian) GeneCard AmiGO Pubmed Google

Top Associated Genes:

  • Hs.432315 PDE4DIP Phosphodiesterase 4D interacting protein (myomegalin) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.368160 PCDHGC3 Protocadherin gamma subfamily A, 12 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.463041 RERE Arginine-glutamic acid dipeptide (RE) repeats GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.410969 NTRK3 Neurotrophic tyrosine kinase, receptor, type 3 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.517603 MFNG Manic fringe homolog (Drosophila) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.555904 RASAL2 RAS protein activator like 2 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.489033 ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.218040 ITGB3 Integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.301865 DCT Dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.371013 JMJD2B Jumonji domain containing 2B GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.518804 ANKRD17 Ankyrin repeat domain 17 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.543913 MRNA; cDNA DKFZp564C163 (from clone DKFZp564C163)
  • Hs.288658 ZNF35 Zinc finger protein 35 (clone HF.10) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.24598 ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.557585 IDS Iduronate 2-sulfatase (Hunter syndrome) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.155975 PTPRCAP Protein tyrosine phosphatase, receptor type, C-associated protein GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.38738 CLDN15 Claudin 15 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.510635 IGHG1 Immunoglobulin heavy constant gamma 1 (G1m marker) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.116470 LRRC16 Leucine rich repeat containing 16 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.435711 TRIM2 Tripartite motif-containing 2 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.518834 B3GALT2 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.505676 CIP29 Cytokine induced protein 29 kDa GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.167679 SH3BP2 SH3-domain binding protein 2 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.434980 APP Amyloid beta (A4) precursor protein (peptidase nexin-II, Alzheimer disease) GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.138860 ARHGAP1 Rho GTPase activating protein 1 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.343522 ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.515560 KLK2 Kallikrein 2, prostatic GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.202354 DIO2 Deiodinase, iodothyronine, type II GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.120950 RHAG Rhesus blood group-associated glycoprotein GeneCard AmiGO Pubmed Google Pubmed2 Google2
  • Hs.2399 MMP14 Matrix metallopeptidase 14 (membrane-inserted) GeneCard AmiGO Pubmed Google Pubmed2 Google2

    Datasets Info:

    Breast Cancer & Normal Samples
    Datasets that are related to breast cancer or contain normal samples
  • GDS1050 (13 samples) Valproic acid effect on theca cells (HG-U133A)
  • GDS1051 (13 samples) Valproic acid effect on theca cells (HG-U133B)
  • GDS1087 (30 samples) Normal tissues of diverse types (SHBA)
  • GDS1088 (11 samples) Normal tissues of diverse types (SHDP)
  • GDS1094 (45 samples) Estrogen receptor alpha/beta heterodimer action in response to estrogen and tamoxifen
  • GDS1096 (36 samples) Normal tissues of various types
  • GDS1250 (8 samples) Atypical ductal hyperplasia and breast cancer
  • GDS1304 (11 samples) Cigarette smoking effect on small airway epithelium
  • GDS1312 (10 samples) Squamous lung cancer
  • GDS1321 (24 samples) Barrett's metaplasia progression to adenocarcinoma
  • GDS1326 (12 samples) Breast cancer cells reexpressing estrogen receptor alpha response to 17beta-estradiol
  • GDS1329 (49 samples) Molecular apocrine breast tumors
  • GDS261 (12 samples) Asthma exacerbatory factors
  • GDS360 (24 samples) Breast cancer and docetaxel treatment
  • GDS422 (24 samples) Normal human tissue expression profiling (HG-U95A)
  • GDS483 (9 samples) DACH1-responsive genes
  • GDS484 (10 samples) Uterine fibroid and normal myometrial tissue
  • GDS505 (17 samples) Renal clear cell carcinoma (HG-U133A)
  • GDS507 (17 samples) Renal clear cell carcinoma (HG-U133B)
  • GDS511 (14 samples) Postmortem skeletal muscle
  • GDS596 (158 samples) Large-scale analysis of the human transcriptome (HG-U133A)
  • GDS619 (91 samples) Lung neuroendocrine tumor classification
  • GDS651 (37 samples) Heart failure arising from different etiologies
  • GDS806 (60 samples) Estrogen positive breast cancer recurrence during tamoxifen therapy: whole tissue tumor
  • GDS807 (60 samples) Estrogen positive breast cancer recurrence during tamoxifen therapy: microdissected tumor
  • GDS84 (84 samples) Breast tumor characterization
  • GDS845 (18 samples) Breast cancer cell line ME16C response to chemotherapeutics: time course
  • GDS846 (19 samples) Breast cancer cell line HME-CC response to chemotherapeutics: time course
  • GDS847 (19 samples) Breast cancer cell line MCF-7 response to chemotherapeutics: time course
  • GDS848 (19 samples) Breast cancer cell line ZR-75-1 response to chemotherapeutics: time course
  • GDS881 (18 samples) Breast cancer and selective estrogen receptor modulators
  • GDS884 (20 samples) Estradiol effect on osteosarcoma cells expressing estrogen receptor alpha or beta: time course
  • GDS90 (26 samples) Mammary epithelial cells and breast cancer
  • GDS901 (12 samples) Estrogen receptor alpha L540Q mutation effect on gene induction by estradiol: time course
  • GDS963 (36 samples) Macular degeneration and dermal fibroblast response to sublethal oxidative stress

    Keys

  • Column: Dataset. Each dataset may contain tens to hundreds of array samples.
  • Row: Gene. The probe sequences for a gene may be different in different datasets.
  • Red color: Positive correlation, i.e., within the dataset (column) the query gene (in the title) and the gene represented in the row show positive correlations in their expressions.
  • Green color: Negative correlation, i.e., within the dataset (column) the query gene (in the title) and the gene represented in the row show negative correlations in their expressions.

    Questions about FABA?

  • Short answer: FABA is in silico two-hybrid software. It fishes for genes with correlated expressions and related functions.
  • Summary
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