FABA 2Beta
--- Functional Analysis By Association
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Genes Associated With Hs.184720 ALMS1 Human Alstrom syndrome 1 
Query Gene: Hs.184720 ALMS1 Alstrom syndrome 1 GeneCard AmiGO Pubmed GoogleTop Associated Genes: Hs.445000 PTGER3 Prostaglandin E receptor 3 (subtype EP3)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.407643 PCDH9 Protocadherin 9
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.489786 CFTR Cystic fibrosis transmembrane conductance regulator, ATP-binding cassette (sub-family C, member 7)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.472475 MACF1 Microtubule-actin crosslinking factor 1
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.493919 MPZL1 Myelin protein zero-like 1
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.488293 EGFR Epidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.453951 NRG1 Neuregulin 1
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.159799 THRAP2 Thyroid hormone receptor associated protein 2
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.104134 HMX1 Homeo box (H6 family) 1
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.225084 C10orf95 Chromosome 10 open reading frame 95
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.468663 USP34 Ubiquitin specific peptidase 34
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.119889 RAP2C RAP2C, member of RAS oncogene family
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.89404 MSX2 Msh homeo box homolog 2 (Drosophila)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.432121 PRDX2 Peroxiredoxin 2
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.32505 KCNJ4 Potassium inwardly-rectifying channel, subfamily J, member 4
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.355934 SFPQ Splicing factor proline/glutamine-rich (polypyrimidine tract binding protein associated)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.76253 ATXN2 Ataxin 2
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.470907 AK2 Adenylate kinase 2
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.368160 PCDHGC3 Protocadherin gamma subfamily A, 12
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.388170 FLJ10534 Hypothetical protein FLJ10534
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.30385 MLLT10 Myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.155204 ZNF174 Zinc finger protein 174
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.127675 CLN8 Chromosome 8 open reading frame 61
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.437211 PDE4C Phosphodiesterase 4C, cAMP-specific (phosphodiesterase E1 dunce homolog, Drosophila)
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.482411 SMA4 Hypothetical protein LOC153561
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.533787 KIAA0286 KIAA0286 protein
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.171825 BHLHB2 Basic helix-loop-helix domain containing, class B, 2
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.306178 MERTK C-mer proto-oncogene tyrosine kinase
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.269128 PPP2R1B Protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform
GeneCard AmiGO Pubmed Google Pubmed2 Google2 Hs.368587 PRLR Prolactin receptor
GeneCard AmiGO Pubmed Google Pubmed2 Google2  Datasets Info:Breast Cancer & Normal Samples Datasets that are related to breast cancer or contain normal samples GDS1050 (13 samples) Valproic acid effect on theca cells (HG-U133A) GDS1051 (13 samples) Valproic acid effect on theca cells (HG-U133B) GDS1087 (30 samples) Normal tissues of diverse types (SHBA) GDS1088 (11 samples) Normal tissues of diverse types (SHDP) GDS1096 (36 samples) Normal tissues of various types GDS1250 (8 samples) Atypical ductal hyperplasia and breast cancer GDS1304 (11 samples) Cigarette smoking effect on small airway epithelium GDS1312 (10 samples) Squamous lung cancer GDS1321 (24 samples) Barrett's metaplasia progression to adenocarcinoma GDS1326 (12 samples) Breast cancer cells reexpressing estrogen receptor alpha response to 17beta-estradiol GDS1329 (49 samples) Molecular apocrine breast tumors GDS261 (12 samples) Asthma exacerbatory factors GDS360 (24 samples) Breast cancer and docetaxel treatment GDS424 (24 samples) Normal human tissue expression profiling (HG-U95C) GDS426 (24 samples) Normal human tissue expression profiling (HG-U95E) GDS483 (9 samples) DACH1-responsive genes GDS484 (10 samples) Uterine fibroid and normal myometrial tissue GDS505 (17 samples) Renal clear cell carcinoma (HG-U133A) GDS507 (17 samples) Renal clear cell carcinoma (HG-U133B) GDS511 (14 samples) Postmortem skeletal muscle GDS651 (37 samples) Heart failure arising from different etiologies GDS707 (30 samples) Aging brain: frontal cortex expression profiles at various ages GDS807 (60 samples) Estrogen positive breast cancer recurrence during tamoxifen therapy: microdissected tumor GDS845 (18 samples) Breast cancer cell line ME16C response to chemotherapeutics: time course GDS846 (19 samples) Breast cancer cell line HME-CC response to chemotherapeutics: time course GDS847 (19 samples) Breast cancer cell line MCF-7 response to chemotherapeutics: time course GDS848 (19 samples) Breast cancer cell line ZR-75-1 response to chemotherapeutics: time course GDS881 (18 samples) Breast cancer and selective estrogen receptor modulators GDS884 (20 samples) Estradiol effect on osteosarcoma cells expressing estrogen receptor alpha or beta: time course GDS901 (12 samples) Estrogen receptor alpha L540Q mutation effect on gene induction by estradiol: time course GDS963 (36 samples) Macular degeneration and dermal fibroblast response to sublethal oxidative stressKeys
Column: Dataset. Each dataset may contain tens to hundreds of array samples.
Row: Gene. The probe sequences for a gene may be different in different datasets.
Red color: Positive correlation, i.e., within the dataset (column) the query gene (in the title) and the gene represented in the row show positive correlations in their expressions.
Green color: Negative correlation, i.e., within the dataset (column) the query gene (in the title) and the gene represented in the row show negative correlations in their expressions.
Questions about FABA?
Short answer: FABA is in silico two-hybrid software. It fishes for genes with correlated expressions and related functions.
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